{
  "_id": "6a49a572162b78b26a584f7e",
  "Type": "Package",
  "Package": "cobiclust",
  "Title": "Biclustering via Latent Block Model Adapted to Overdispersed\nCount Data",
  "Version": "0.1.0",
  "Authors@R": "c(person(given = \"Julie\",\nfamily = \"Aubert\",\nrole = c(\"aut\", \"cre\"),\nemail = \"julie.aubert@inrae.fr\",\ncomment = c(ORCID = \"0000-0001-5203-5748\")),\nperson(given = \"INRAE\",\nrole = \"cph\"))",
  "Description": "Implementation of a probabilistic method for biclustering\nadapted to overdispersed count data. It is a Gamma-Poisson\nLatent Block Model.  It also implements two selection criteria\nin order to select the number of biclusters.",
  "License": "GPL-3",
  "URL": "https://github.com/julieaubert/cobiclust",
  "BugReports": "https://github.com/julieaubert/cobiclust/issues",
  "Encoding": "UTF-8",
  "Language": "en-US",
  "RoxygenNote": "7.1.1",
  "Repository": "https://julieaubert.r-universe.dev",
  "Date/Publication": "2020-09-05 13:07:33 UTC",
  "RemoteUrl": "https://github.com/julieaubert/cobiclust",
  "RemoteRef": "HEAD",
  "RemoteSha": "834fdb2a4e429a27315b4f3e3f87b0898609408a",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-20 09:22:06 UTC",
    "User": "root"
  },
  "Author": "Julie Aubert [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-5203-5748>),\nINRAE [cph]",
  "Maintainer": "Julie Aubert <julie.aubert@inrae.fr>",
  "_user": "julieaubert",
  "_type": "src",
  "_file": "cobiclust_0.1.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/b84cee2ffee9232862aba690da5590aede62c5cb560f02e3da1e3a75fb35c1f4",
  "_filesize": 950169,
  "_sha256": "b84cee2ffee9232862aba690da5590aede62c5cb560f02e3da1e3a75fb35c1f4",
  "_expires": "2026-10-13T00:29:36.000Z",
  "_created": "2026-06-20T09:22:06.000Z",
  "_published": "2026-07-05T00:29:38.656Z",
  "_jobs": [
    {
      "job": 85179064484,
      "time": 112,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7764079257"
    },
    {
      "job": 85179064527,
      "time": 104,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7764078204"
    },
    {
      "job": 85179064479,
      "time": 170,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7764083107"
    },
    {
      "job": 85179064511,
      "time": 119,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7764077303"
    },
    {
      "job": 85179064281,
      "time": 163,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7764064835"
    },
    {
      "job": 85179064509,
      "time": 102,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7764077936"
    },
    {
      "job": 85179064397,
      "time": 60,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7764072784"
    },
    {
      "job": 85179064491,
      "time": 60,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7764072672"
    },
    {
      "job": 85179064423,
      "time": 78,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7764074953"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/julieaubert/actions/runs/27866799599",
  "_status": "success",
  "_upstream": "https://github.com/julieaubert/cobiclust",
  "_commit": {
    "id": "834fdb2a4e429a27315b4f3e3f87b0898609408a",
    "author": "Aubert Julie <julie.aubert@agroparistech.fr>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Merge pull request #3 from julieaubert/add-theme-and-navbar\n\nAdd cobiclust-example",
    "time": 1599311253
  },
  "_maintainer": {
    "name": "Julie Aubert",
    "email": "julie.aubert@inrae.fr",
    "orcid": "0000-0001-5203-5748"
  },
  "_distro": "noble",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "cluster",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "spelling",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "julieaubert",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "julieaubert",
      "count": 32,
      "uuid": 23551715
    }
  ],
  "_userbio": {
    "uuid": 23551715,
    "type": "user",
    "name": "Aubert Julie",
    "followers": 12
  },
  "_downloads": {
    "count": 226,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/cobiclust"
  },
  "_devurl": "https://github.com/julieaubert/cobiclust",
  "_searchresults": 17,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/cobiclust.html",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/julieaubert/cobiclust",
  "_realowner": "julieaubert",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2018-10-15"
    },
    {
      "version": "0.1.2",
      "date": "2024-02-16"
    }
  ],
  "_exports": [
    "alpha_calculation",
    "cobiclust",
    "cobiclustering",
    "dicho",
    "foo_a",
    "init_pam",
    "is.cobiclustering",
    "lb_calculation",
    "penalty",
    "qu_calculation",
    "qukg_calculation",
    "selection_criteria"
  ],
  "_help": [
    {
      "page": "cobiclust",
      "title": "Perform a biclustering adapted to overdispersed count data.",
      "topics": [
        "cobiclust"
      ]
    },
    {
      "page": "selection_criteria",
      "title": "Calculate selection criteria.",
      "topics": [
        "selection_criteria"
      ]
    }
  ],
  "_readme": "https://github.com/julieaubert/cobiclust/raw/HEAD/README.md",
  "_rundeps": [
    "cluster"
  ],
  "_score": 2.929418925714293,
  "_indexed": true,
  "_nocasepkg": "cobiclust",
  "_universes": [
    "julieaubert"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-06-20T09:24:03.000Z",
      "distro": "noble",
      "commit": "834fdb2a4e429a27315b4f3e3f87b0898609408a",
      "fileid": "https://r2.ropensci.org/429a2370f1f8423c9e00be00d6c0e810c6a7379519930bdf8a588ccc3923551c",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/julieaubert/actions/runs/27866799599"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-06-20T09:23:55.000Z",
      "distro": "noble",
      "commit": "834fdb2a4e429a27315b4f3e3f87b0898609408a",
      "fileid": "https://r2.ropensci.org/0a5e2be0d819a4bc54554a4a6cb57e239c4a728b29dba98a46a0fd2d87471340",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/julieaubert/actions/runs/27866799599"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-06-20T09:24:35.000Z",
      "commit": "834fdb2a4e429a27315b4f3e3f87b0898609408a",
      "fileid": "https://r2.ropensci.org/b64c3a768d7b97e2ed38c9de624fbdf3d5aca95f0fba45ccf744f2a3d6fd0ae7",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/julieaubert/actions/runs/27866799599"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-06-20T09:23:49.000Z",
      "commit": "834fdb2a4e429a27315b4f3e3f87b0898609408a",
      "fileid": "https://r2.ropensci.org/959fb11829131acf6747f1cd3919b8e34056770ebc34d53c36a869e4c9f91077",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/julieaubert/actions/runs/27866799599"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0",
      "date": "2026-06-20T09:24:02.000Z",
      "commit": "834fdb2a4e429a27315b4f3e3f87b0898609408a",
      "fileid": "https://r2.ropensci.org/986bd3c315f474f0b567ca3cd96a8b55c5bc8536456ff3c9b2b529ccd9f48e86",
      "status": "success",
      "buildurl": "https://github.com/r-universe/julieaubert/actions/runs/27866799599"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-06-20T09:23:07.000Z",
      "commit": "834fdb2a4e429a27315b4f3e3f87b0898609408a",
      "fileid": "https://r2.ropensci.org/441ae0f680e79b3c379a35d7f593647f263ebeec361372f35e88d156f622d327",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/julieaubert/actions/runs/27866799599"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-06-20T09:23:05.000Z",
      "commit": "834fdb2a4e429a27315b4f3e3f87b0898609408a",
      "fileid": "https://r2.ropensci.org/57c65b2a05fec0db2148a91f382e34ec2a8051324bedc02e097c678431168141",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/julieaubert/actions/runs/27866799599"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-06-20T09:23:23.000Z",
      "commit": "834fdb2a4e429a27315b4f3e3f87b0898609408a",
      "fileid": "https://r2.ropensci.org/8a4b83a541c60ff3d911d837d2855904ae7a2f56b4418ccd019302f9b8f2b2cf",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/julieaubert/actions/runs/27866799599"
    }
  ]
}